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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF66_7001Hypothetical protein. (157 aa)    
Predicted Functional Partners:
petC
Cytochrome c1.
  
     0.689
CF66_3035
Hypothetical protein.
  
     0.630
flgC
Flagellar basal-body rod protein flgC; Belongs to the flagella basal body rod proteins family.
    
   0.576
hslR
Heat shock protein 15; Belongs to the HSP15 family.
   
    0.568
braZ
Branched-chain amino acid transport system 3 carrier protein.
  
     0.560
cc4
Cytochrome c4.
  
     0.551
CF66_1015
Cytochrome c5.
  
     0.524
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
     0.523
CF66_2401
Hypothetical protein.
  
     0.517
atpI
ATP synthase protein I.
  
     0.475
Your Current Organism:
Photodesmus katoptron
NCBI taxonomy Id: 28176
Other names: Anomalops katoptron symbiont, C. Photodesmus katoptron, Candidatus Photodesmus katoptron
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