STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttg2FToluene transport system; Belongs to the BolA/IbaG family. (90 aa)    
Predicted Functional Partners:
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
    0.839
rsvB
Anti sigma factor b.
       0.786
mlaC
Phospholipid ABC transporter protein.
       0.786
mlaD
Phospholipid ABC transporter-binding protein.
       0.786
mlaE
Phospholipid ABC transporter permease protein.
       0.786
mlaF
Phospholipid import ATP-binding protein.
       0.786
grxD
Glutaredoxin-4; Belongs to the glutaredoxin family. Monothiol subfamily.
   
 
 0.634
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
       0.585
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
   
    0.416
Your Current Organism:
Photodesmus katoptron
NCBI taxonomy Id: 28176
Other names: Anomalops katoptron symbiont, C. Photodesmus katoptron, Candidatus Photodesmus katoptron
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.