Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
motXsSodium-type polar flagellar protein motX. (208 aa)    
Predicted Functional Partners:
motY
Sodium-type flagellar protein.
  
 
 0.976
rim
Ribosomal protein S12 methylthiotransferase Rim.
  
 
 
 0.961
flgT
Flagellar protein.
  
 
 
 0.958
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
 
   0.876
flgE
Flagellar hook protein flgE.
  
 
 
 0.824
flgB
Flagellar basal-body rod protein flgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
    
 
 0.823
flgC
Flagellar basal-body rod protein flgC; Belongs to the flagella basal body rod proteins family.
   
 
 0.819
hisS
histidyl-tRNA synthetase.
    
  0.808
fliE
Flagellar hook-basal body complex protein.
    
 
 0.796
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
    
 
 0.794
Your Current Organism:
Photodesmus katoptron
NCBI taxonomy Id: 28176
Other names: Anomalops katoptron symbiont, C. Photodesmus katoptron, Candidatus Photodesmus katoptron
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