STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEJ67837.1HflK protein; HflC and HflK could encode or regulate a protease. (375 aa)    
Predicted Functional Partners:
OEJ67838.1
Protease modulator HflC; HflC and HflK could regulate a protease.
 
 0.999
OEJ69006.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.965
hflX
GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
  
  
 0.851
yidC
Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
 
 
 0.733
OEJ67650.1
Paraslipin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.639
OEJ66899.1
Phosphoribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.619
OEJ69197.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
  0.613
OEJ67836.1
Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
   
   0.600
OEJ67641.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.563
OEJ67557.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.
  
 0.563
Your Current Organism:
Magnetovibrio blakemorei
NCBI taxonomy Id: 28181
Other names: DSM 18854, M. blakemorei, Magnetovibrio blakemorei Bazylinski et al. 2013, magnetite-containing magnetic vibrio, strain MV-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.