STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEJ66242.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (65 aa)    
Predicted Functional Partners:
OEJ69708.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.948
OEJ66243.1
Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.897
OEJ66244.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.890
OEJ66241.1
Putative nitrogen fixation protein NifT; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.889
OEJ66252.1
Ferredoxin III, nif-specific; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.849
OEJ66250.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.844
OEJ66233.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.822
OEJ66248.1
Nitrogen fixation protein NifX; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.822
OEJ66240.1
Nitrogenase molybdenum-iron protein subunit beta; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
 
  0.813
OEJ66264.1
Nitrogen fixation protein NifZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.802
Your Current Organism:
Magnetovibrio blakemorei
NCBI taxonomy Id: 28181
Other names: DSM 18854, M. blakemorei, Magnetovibrio blakemorei Bazylinski et al. 2013, magnetite-containing magnetic vibrio, strain MV-1
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