STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M6VSJ8_9LEPTUnannotated protein; Belongs to the glycosyl hydrolase 31 family. (719 aa)    
Predicted Functional Partners:
M6VDE2_9LEPT
Unannotated protein.
 
 
 0.835
M6VAU9_9LEPT
Unannotated protein.
    
 
 0.772
galK
Unannotated protein; Belongs to the GHMP kinase family. GalK subfamily.
 
   
 0.727
rnc
Unannotated protein; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
   0.725
rplK
Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
 
 0.719
M6V8A6_9LEPT
Unannotated protein.
 
  
 0.714
rpsP
Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.711
rplS
Unannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
    
   0.711
rpmF
Unannotated protein; Belongs to the bacterial ribosomal protein bL32 family.
    
   0.711
rpsI
Unannotated protein; Belongs to the universal ribosomal protein uS9 family.
    
   0.711
Your Current Organism:
Leptospira noguchii
NCBI taxonomy Id: 28182
Other names: ATCC 43288, DSM 21520, L. noguchii, strain CZ 214
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