Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001568325_03813 | M6VBG2_9LEPT | GCA_001568325_03813 | GCA_001568325_01097 | Unannotated protein. | Unannotated protein. | 0.466 |
GCA_001568325_03813 | atpE | GCA_001568325_03813 | GCA_001568325_02436 | Unannotated protein. | Unannotated protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.998 |
M6V9U0_9LEPT | M6VBG2_9LEPT | GCA_001568325_03767 | GCA_001568325_01097 | Unannotated protein. | Unannotated protein. | 0.482 |
M6VBG2_9LEPT | GCA_001568325_03813 | GCA_001568325_01097 | GCA_001568325_03813 | Unannotated protein. | Unannotated protein. | 0.466 |
M6VBG2_9LEPT | M6V9U0_9LEPT | GCA_001568325_01097 | GCA_001568325_03767 | Unannotated protein. | Unannotated protein. | 0.482 |
M6VBG2_9LEPT | M6VFA6_9LEPT | GCA_001568325_01097 | GCA_001568325_02270 | Unannotated protein. | Unannotated protein. | 0.490 |
M6VBG2_9LEPT | aroA | GCA_001568325_01097 | GCA_001568325_00361 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.507 |
M6VBG2_9LEPT | atpE | GCA_001568325_01097 | GCA_001568325_02436 | Unannotated protein. | Unannotated protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.449 |
M6VBG2_9LEPT | atpG | GCA_001568325_01097 | GCA_001568325_02432 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.452 |
M6VBG2_9LEPT | leuC | GCA_001568325_01097 | GCA_001568325_00757 | Unannotated protein. | Unannotated protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.641 |
M6VBG2_9LEPT | leuD | GCA_001568325_01097 | GCA_001568325_00756 | Unannotated protein. | Unannotated protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.689 |
M6VBG2_9LEPT | metG | GCA_001568325_01097 | GCA_001568325_01307 | Unannotated protein. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.553 |
M6VBG2_9LEPT | pdxH | GCA_001568325_01097 | GCA_001568325_02145 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.474 |
M6VFA6_9LEPT | M6VBG2_9LEPT | GCA_001568325_02270 | GCA_001568325_01097 | Unannotated protein. | Unannotated protein. | 0.490 |
aroA | M6VBG2_9LEPT | GCA_001568325_00361 | GCA_001568325_01097 | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Unannotated protein. | 0.507 |
aroA | metG | GCA_001568325_00361 | GCA_001568325_01307 | Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.649 |
atpE | GCA_001568325_03813 | GCA_001568325_02436 | GCA_001568325_03813 | Unannotated protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Unannotated protein. | 0.998 |
atpE | M6VBG2_9LEPT | GCA_001568325_02436 | GCA_001568325_01097 | Unannotated protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Unannotated protein. | 0.449 |
atpE | atpG | GCA_001568325_02436 | GCA_001568325_02432 | Unannotated protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
atpG | M6VBG2_9LEPT | GCA_001568325_02432 | GCA_001568325_01097 | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | Unannotated protein. | 0.452 |
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