STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001568325_01139Unannotated protein. (170 aa)    
Predicted Functional Partners:
GCA_001568325_01144
Unannotated protein.
 
 
  0.812
GCA_001568325_01140
Unannotated protein.
 
 
 0.793
GCA_001568325_01141
Unannotated protein.
 
    
0.640
rnc
Unannotated protein; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.619
M6VIU7_9LEPT
Unannotated protein.
    
  0.612
GCA_001568325_01143
Unannotated protein.
 
 
 0.572
aroB
Unannotated protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
    
  0.552
GCA_001568325_01134
Unannotated protein.
     
 0.497
GCA_001568325_01137
Unannotated protein.
       0.485
GCA_001568325_01138
Unannotated protein.
       0.485
Your Current Organism:
Leptospira noguchii
NCBI taxonomy Id: 28182
Other names: ATCC 43288, DSM 21520, L. noguchii, strain CZ 214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.