Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001568325_02400 | M6VBY2_9LEPT | GCA_001568325_02400 | GCA_001568325_02401 | Unannotated protein. | Unannotated protein. | 0.746 |
GCA_001568325_02400 | gcvH | GCA_001568325_02400 | GCA_001568325_02403 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.590 |
GCA_001568325_02400 | gcvP | GCA_001568325_02400 | GCA_001568325_02402 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.698 |
GCA_001568325_02400 | gcvT | GCA_001568325_02400 | GCA_001568325_02404 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.561 |
M6VBY2_9LEPT | GCA_001568325_02400 | GCA_001568325_02401 | GCA_001568325_02400 | Unannotated protein. | Unannotated protein. | 0.746 |
M6VBY2_9LEPT | gcvH | GCA_001568325_02401 | GCA_001568325_02403 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.610 |
M6VBY2_9LEPT | gcvP | GCA_001568325_02401 | GCA_001568325_02402 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.723 |
M6VBY2_9LEPT | gcvT | GCA_001568325_02401 | GCA_001568325_02404 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.579 |
gcvH | GCA_001568325_02400 | GCA_001568325_02403 | GCA_001568325_02400 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Unannotated protein. | 0.590 |
gcvH | M6VBY2_9LEPT | GCA_001568325_02403 | GCA_001568325_02401 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Unannotated protein. | 0.610 |
gcvH | gcvP | GCA_001568325_02403 | GCA_001568325_02402 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
gcvH | gcvT | GCA_001568325_02403 | GCA_001568325_02404 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.999 |
gcvP | GCA_001568325_02400 | GCA_001568325_02402 | GCA_001568325_02400 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Unannotated protein. | 0.698 |
gcvP | M6VBY2_9LEPT | GCA_001568325_02402 | GCA_001568325_02401 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Unannotated protein. | 0.723 |
gcvP | gcvH | GCA_001568325_02402 | GCA_001568325_02403 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.999 |
gcvP | gcvT | GCA_001568325_02402 | GCA_001568325_02404 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.999 |
gcvT | GCA_001568325_02400 | GCA_001568325_02404 | GCA_001568325_02400 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | Unannotated protein. | 0.561 |
gcvT | M6VBY2_9LEPT | GCA_001568325_02404 | GCA_001568325_02401 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | Unannotated protein. | 0.579 |
gcvT | gcvH | GCA_001568325_02404 | GCA_001568325_02403 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.999 |
gcvT | gcvP | GCA_001568325_02404 | GCA_001568325_02402 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |