STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN34065.1Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. (62 aa)    
Predicted Functional Partners:
CEN34068.1
Sigma-W factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.808
CEN41842.1
Tetratricopeptide repeat protein.
  
     0.686
ypjG
Uncharacterized deacetylase YpjG.
       0.685
bsaA
Glutathione peroxidase homolog BsaA; Belongs to the glutathione peroxidase family.
       0.683
CEN34056.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.643
CEN37713.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.641
CEN34035.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.633
CEN37709.1
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.615
CEN37163.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.598
CEN38992.1
TonB-dependent receptor; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
     0.577
Your Current Organism:
Capnocytophaga cynodegmi
NCBI taxonomy Id: 28189
Other names: ATCC 49044, C. cynodegmi, CCUG 24742, CDC group DF-2 like, CIP 103937, DSM 19736, LMG 11513, LMG:11513, NCTC 12243, strain E6447
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.