STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN34734.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (229 aa)    
Predicted Functional Partners:
BamA
Outer membrane protein assembly complex, YaeT protein.
   
   0.824
ispU
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
    0.800
CEN34742.1
Outer membrane protein (fragment).
 
 
   0.792
CEN33570.1
Tetratricopeptide repeat protein.
  
     0.740
CEN39075.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.737
CEN37511.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.708
sprA
Cell surface protein SprA.
  
     0.705
CEN41096.1
Hypothetical protein; No homology to any previously reported sequences.
  
    0.672
CEN41461.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.671
CEN40293.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.658
Your Current Organism:
Capnocytophaga cynodegmi
NCBI taxonomy Id: 28189
Other names: ATCC 49044, C. cynodegmi, CCUG 24742, CDC group DF-2 like, CIP 103937, DSM 19736, LMG 11513, LMG:11513, NCTC 12243, strain E6447
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