Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEN33730.1 | CEN34554.1 | CCYN74_10115 | CCYN74_100188 | Nitroalkane oxidase. | Enoyl-(acyl-carrier-protein) reductase (NADH). | 0.919 |
CEN33730.1 | CEN40952.1 | CCYN74_10115 | CCYN74_50021 | Nitroalkane oxidase. | Beta-ketoacyl-ACP synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.545 |
CEN33730.1 | acpP | CCYN74_10115 | CCYN74_330026 | Nitroalkane oxidase. | Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.655 |
CEN33730.1 | fabD | CCYN74_10115 | CCYN74_420013 | Nitroalkane oxidase. | Malonyl CoA-acyl carrier protein transacylase. | 0.523 |
CEN33730.1 | fabF | CCYN74_10115 | CCYN74_330025 | Nitroalkane oxidase. | 3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.952 |
CEN33730.1 | lpxC/fabZ | CCYN74_10115 | CCYN74_110051 | Nitroalkane oxidase. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.949 |
CEN34554.1 | CEN33730.1 | CCYN74_100188 | CCYN74_10115 | Enoyl-(acyl-carrier-protein) reductase (NADH). | Nitroalkane oxidase. | 0.919 |
CEN34554.1 | CEN40952.1 | CCYN74_100188 | CCYN74_50021 | Enoyl-(acyl-carrier-protein) reductase (NADH). | Beta-ketoacyl-ACP synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.668 |
CEN34554.1 | acpP | CCYN74_100188 | CCYN74_330026 | Enoyl-(acyl-carrier-protein) reductase (NADH). | Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.748 |
CEN34554.1 | fabD | CCYN74_100188 | CCYN74_420013 | Enoyl-(acyl-carrier-protein) reductase (NADH). | Malonyl CoA-acyl carrier protein transacylase. | 0.973 |
CEN34554.1 | fabF | CCYN74_100188 | CCYN74_330025 | Enoyl-(acyl-carrier-protein) reductase (NADH). | 3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.965 |
CEN34554.1 | fabG | CCYN74_100188 | CCYN74_360023 | Enoyl-(acyl-carrier-protein) reductase (NADH). | 3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.925 |
CEN34554.1 | lpxC/fabZ | CCYN74_100188 | CCYN74_110051 | Enoyl-(acyl-carrier-protein) reductase (NADH). | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.968 |
CEN36832.1 | acpP | CCYN74_200030 | CCYN74_330026 | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase. | Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.579 |
CEN36832.1 | lpxA | CCYN74_200030 | CCYN74_110052 | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase. | UDP-N-acetylglucosamine acetyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.801 |
CEN36832.1 | lpxC/fabZ | CCYN74_200030 | CCYN74_110051 | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.987 |
CEN36832.1 | lpxD | CCYN74_200030 | CCYN74_110050 | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase. | UDP-3-O-acylglucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.936 |
CEN40952.1 | CEN33730.1 | CCYN74_50021 | CCYN74_10115 | Beta-ketoacyl-ACP synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Nitroalkane oxidase. | 0.545 |
CEN40952.1 | CEN34554.1 | CCYN74_50021 | CCYN74_100188 | Beta-ketoacyl-ACP synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Enoyl-(acyl-carrier-protein) reductase (NADH). | 0.668 |
CEN40952.1 | acpP | CCYN74_50021 | CCYN74_330026 | Beta-ketoacyl-ACP synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.783 |
page 1 of 4