STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN35593.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (178 aa)    
Predicted Functional Partners:
CEN35597.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.753
CEN35601.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.676
CEN35919.1
Putative GCN5-related N-acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.639
CEN35589.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.586
CEN35585.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.507
CEN36267.1
Acetyltransferase, GNAT family.
  
     0.479
rnc
Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.465
CEN35578.1
Uncharacterized oxidoreductase DltE (fragment).
       0.456
CEN35581.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.455
CEN35605.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.406
Your Current Organism:
Capnocytophaga cynodegmi
NCBI taxonomy Id: 28189
Other names: ATCC 49044, C. cynodegmi, CCUG 24742, CDC group DF-2 like, CIP 103937, DSM 19736, LMG 11513, LMG:11513, NCTC 12243, strain E6447
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.