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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN36826.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (134 aa)    
Predicted Functional Partners:
CEN36500.1
DNA polymerase III subunit alpha.
  
 
 0.999
dnaX
DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
     0.971
CEN34753.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.746
CEN33454.1
DNA polymerase III subunit delta.
 
 
 
 0.715
HolA
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 
 0.707
CEN40073.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.680
CEN38364.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.668
DnaN
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
 
 0.667
CEN33713.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.665
CEN40166.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.665
Your Current Organism:
Capnocytophaga cynodegmi
NCBI taxonomy Id: 28189
Other names: ATCC 49044, C. cynodegmi, CCUG 24742, CDC group DF-2 like, CIP 103937, DSM 19736, LMG 11513, LMG:11513, NCTC 12243, strain E6447
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