STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN37001.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (149 aa)    
Predicted Functional Partners:
CEN40651.1
Heme B/copper cytochrome c oxidase subunit; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.999
CEN37005.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.941
CEN40647.1
Cytochrome c, class I.
 
 
 0.887
CcoG
Protein rdxB.
 
  
 0.835
CEN40623.1
Copper-exporting P-type ATPase A.
 
  
 0.793
CcoS
Nitrogen fixation protein fixS.
 
  
 0.758
CEN40649.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.693
CEN36998.1
Chondroitinsulfatase.
       0.615
CEN37009.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.609
CEN36471.1
Cytochrome c class i.
 
 
 0.597
Your Current Organism:
Capnocytophaga cynodegmi
NCBI taxonomy Id: 28189
Other names: ATCC 49044, C. cynodegmi, CCUG 24742, CDC group DF-2 like, CIP 103937, DSM 19736, LMG 11513, LMG:11513, NCTC 12243, strain E6447
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.