STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN38006.1Beta-lactamase repressor protein. (123 aa)    
Predicted Functional Partners:
CEN38003.1
TonB.
 
  
 0.940
CEN41900.1
Methicillin resistance regulatory protein mecI.
  
  
 
0.919
CEN34001.1
Transcriptional repressor, CopY family.
  
  
 
0.908
CEN34004.1
Putative Peptidase M56 BlaR1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.811
CEN41902.1
Conserved putative Nucleoside-triphosphatase (modular protein).
 
  
 0.777
silP
Silver exporting P-type ATPase.
  
  
 0.672
CEN37998.1
Lactase.
       0.527
CEN38010.1
Acyl-ACP thioesterase.
       0.451
CEN34975.1
Heavy metal-associated domain protein.
  
  
 0.400
Your Current Organism:
Capnocytophaga cynodegmi
NCBI taxonomy Id: 28189
Other names: ATCC 49044, C. cynodegmi, CCUG 24742, CDC group DF-2 like, CIP 103937, DSM 19736, LMG 11513, LMG:11513, NCTC 12243, strain E6447
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