STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN38698.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (366 aa)    
Predicted Functional Partners:
CEN38703.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CEN38695.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.642
CEN38691.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.602
CEN38708.1
Hypothetical protein; No homology to any previously reported sequences.
       0.434
CEN38684.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.416
CEN38687.1
SMI1 / KNR4 family protein.
       0.416
CEN38712.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.404
Your Current Organism:
Capnocytophaga cynodegmi
NCBI taxonomy Id: 28189
Other names: ATCC 49044, C. cynodegmi, CCUG 24742, CDC group DF-2 like, CIP 103937, DSM 19736, LMG 11513, LMG:11513, NCTC 12243, strain E6447
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.