STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN40940.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (256 aa)    
Predicted Functional Partners:
CEN40938.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CEN34997.1
Transport energizing protein, ExbD/TolR family.
  
 
 0.516
CEN37709.1
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.516
CEN37713.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.516
CEN35000.1
Transporter, MotA/TolQ/ExbB proton channel family protein.
  
 
 0.456
CEN35967.1
Transporter, MotA/TolQ/ExbB proton channel family protein.
  
 
 0.456
CEN37721.1
Transporter, MotA/TolQ/ExbB proton channel family protein.
  
 
 0.456
CEN36178.1
OmpA family protein.
  
 
 0.455
Your Current Organism:
Capnocytophaga cynodegmi
NCBI taxonomy Id: 28189
Other names: ATCC 49044, C. cynodegmi, CCUG 24742, CDC group DF-2 like, CIP 103937, DSM 19736, LMG 11513, LMG:11513, NCTC 12243, strain E6447
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.