STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN40946.1Protein rfbU. (369 aa)    
Predicted Functional Partners:
CEN40949.1
Putative Conserved Endo-1,4-beta-xylanase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.773
CEN40942.1
Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
     0.509
CEN34830.1
TvaII.
   
 0.508
GBE
1,4-alpha-glucan-branching enzyme.
   
 0.508
CEN40361.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 
 0.483
CEN40944.1
Alkaline phosphatase IV; Belongs to the alkaline phosphatase family.
  
    0.440
Your Current Organism:
Capnocytophaga cynodegmi
NCBI taxonomy Id: 28189
Other names: ATCC 49044, C. cynodegmi, CCUG 24742, CDC group DF-2 like, CIP 103937, DSM 19736, LMG 11513, LMG:11513, NCTC 12243, strain E6447
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.