STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN41788.1Glycogen phosphorylase. (1415 aa)    
Predicted Functional Partners:
GBE
1,4-alpha-glucan-branching enzyme.
 
 0.994
CEN35074.1
Starch synthase catalytic domain protein.
 
 
 0.992
CEN37915.1
Putative alpha-amylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.965
CEN37934.1
Putative 4-alpha-glucanotransferase and amylo-alpha-1,6-glucosidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.951
pgcA
Phosphoglucomutase.
  
 
 0.943
CEN34830.1
TvaII.
  
 0.921
susB
Glucan 1,4-alpha-glucosidase SusB.
    
  0.900
susB-2
Glucan 1,4-alpha-glucosidase SusB.
    
  0.900
CEN34018.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.862
CEN37917.1
Uncharacterized glycosyltransferase.
 
 
 0.764
Your Current Organism:
Capnocytophaga cynodegmi
NCBI taxonomy Id: 28189
Other names: ATCC 49044, C. cynodegmi, CCUG 24742, CDC group DF-2 like, CIP 103937, DSM 19736, LMG 11513, LMG:11513, NCTC 12243, strain E6447
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.