STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN41999.1Polysaccharide biosynthesis/export protein. (822 aa)    
Predicted Functional Partners:
CEN40958.1
Tyrosine-protein kinase involved in exopolysaccharide biosynthesis.
  
 
 0.996
CEN42001.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.951
CEN33806.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.640
CEN35932.1
Putative UDP-GlcNAc-4,6-dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.604
pglC
Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase.
  
  
 0.581
CEN42003.1
DHHA1 domain protein.
       0.581
gldI
Peptidyl-prolyl cis-trans isomerase.
     
 0.538
CEN41995.1
Sua5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family.
       0.536
CEN41997.1
Cytidine and deoxycytidylate deaminase zinc-binding region.
       0.536
mrp
Protein mrp homolog; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.525
Your Current Organism:
Capnocytophaga cynodegmi
NCBI taxonomy Id: 28189
Other names: ATCC 49044, C. cynodegmi, CCUG 24742, CDC group DF-2 like, CIP 103937, DSM 19736, LMG 11513, LMG:11513, NCTC 12243, strain E6447
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