Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CJ673_02610 | CJ673_02615 | GCA_001572855_00288 | GCA_001572855_00287 | Unannotated protein. | Unannotated protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.773 |
CJ673_02610 | CJ673_02620 | GCA_001572855_00288 | GCA_001572855_00286 | Unannotated protein. | Unannotated protein. | 0.773 |
CJ673_02610 | CJ673_02625 | GCA_001572855_00288 | GCA_001572855_00285 | Unannotated protein. | Unannotated protein; Belongs to the UPF0102 family. | 0.459 |
CJ673_02610 | mqnE | GCA_001572855_00288 | GCA_001572855_00289 | Unannotated protein. | Unannotated protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. | 0.762 |
CJ673_02610 | thiS | GCA_001572855_00288 | GCA_001572855_00284 | Unannotated protein. | Unannotated protein. | 0.459 |
CJ673_02615 | CJ673_02610 | GCA_001572855_00287 | GCA_001572855_00288 | Unannotated protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Unannotated protein. | 0.773 |
CJ673_02615 | CJ673_02620 | GCA_001572855_00287 | GCA_001572855_00286 | Unannotated protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Unannotated protein. | 0.778 |
CJ673_02615 | CJ673_02625 | GCA_001572855_00287 | GCA_001572855_00285 | Unannotated protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Unannotated protein; Belongs to the UPF0102 family. | 0.459 |
CJ673_02615 | mqnE | GCA_001572855_00287 | GCA_001572855_00289 | Unannotated protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Unannotated protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. | 0.762 |
CJ673_02615 | thiS | GCA_001572855_00287 | GCA_001572855_00284 | Unannotated protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Unannotated protein. | 0.459 |
CJ673_02620 | CJ673_02610 | GCA_001572855_00286 | GCA_001572855_00288 | Unannotated protein. | Unannotated protein. | 0.773 |
CJ673_02620 | CJ673_02615 | GCA_001572855_00286 | GCA_001572855_00287 | Unannotated protein. | Unannotated protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.778 |
CJ673_02620 | CJ673_02625 | GCA_001572855_00286 | GCA_001572855_00285 | Unannotated protein. | Unannotated protein; Belongs to the UPF0102 family. | 0.459 |
CJ673_02620 | mqnE | GCA_001572855_00286 | GCA_001572855_00289 | Unannotated protein. | Unannotated protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. | 0.762 |
CJ673_02620 | thiS | GCA_001572855_00286 | GCA_001572855_00284 | Unannotated protein. | Unannotated protein. | 0.459 |
CJ673_02625 | CJ673_02610 | GCA_001572855_00285 | GCA_001572855_00288 | Unannotated protein; Belongs to the UPF0102 family. | Unannotated protein. | 0.459 |
CJ673_02625 | CJ673_02615 | GCA_001572855_00285 | GCA_001572855_00287 | Unannotated protein; Belongs to the UPF0102 family. | Unannotated protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.459 |
CJ673_02625 | CJ673_02620 | GCA_001572855_00285 | GCA_001572855_00286 | Unannotated protein; Belongs to the UPF0102 family. | Unannotated protein. | 0.459 |
CJ673_02625 | mqnE | GCA_001572855_00285 | GCA_001572855_00289 | Unannotated protein; Belongs to the UPF0102 family. | Unannotated protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. | 0.512 |
CJ673_02625 | thiS | GCA_001572855_00285 | GCA_001572855_00284 | Unannotated protein; Belongs to the UPF0102 family. | Unannotated protein. | 0.782 |
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