Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CJ673_01360 | CJ673_03425 | GCA_001572855_00707 | GCA_001572855_01770 | Unannotated protein. | Unannotated protein. | 0.823 |
CJ673_01360 | CJ673_06670 | GCA_001572855_00707 | GCA_001572855_01755 | Unannotated protein. | Unannotated protein. | 0.860 |
CJ673_01360 | accD | GCA_001572855_00707 | GCA_001572855_00706 | Unannotated protein. | Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.785 |
CJ673_01360 | rlmH | GCA_001572855_00707 | GCA_001572855_00708 | Unannotated protein. | Unannotated protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.795 |
CJ673_01360 | tenA | GCA_001572855_00707 | GCA_001572855_00958 | Unannotated protein. | Unannotated protein; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4- amino-5-aminomethyl-2-methylpyrimidine to 4-amino-5-hydroxymethyl-2- methylpyrimidine (HMP); Belongs to the TenA family. | 0.799 |
CJ673_01360 | thiC | GCA_001572855_00707 | GCA_001572855_00930 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.858 |
CJ673_01360 | thiD | GCA_001572855_00707 | GCA_001572855_01897 | Unannotated protein. | Unannotated protein. | 0.997 |
CJ673_01360 | thiG | GCA_001572855_00707 | GCA_001572855_01577 | Unannotated protein. | Unannotated protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.891 |
CJ673_01360 | thiL | GCA_001572855_00707 | GCA_001572855_00763 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.980 |
CJ673_01360 | thiM | GCA_001572855_00707 | GCA_001572855_00957 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.988 |
CJ673_03425 | CJ673_01360 | GCA_001572855_01770 | GCA_001572855_00707 | Unannotated protein. | Unannotated protein. | 0.823 |
CJ673_03425 | CJ673_06670 | GCA_001572855_01770 | GCA_001572855_01755 | Unannotated protein. | Unannotated protein. | 0.823 |
CJ673_03425 | tenA | GCA_001572855_01770 | GCA_001572855_00958 | Unannotated protein. | Unannotated protein; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4- amino-5-aminomethyl-2-methylpyrimidine to 4-amino-5-hydroxymethyl-2- methylpyrimidine (HMP); Belongs to the TenA family. | 0.658 |
CJ673_03425 | thiC | GCA_001572855_01770 | GCA_001572855_00930 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.908 |
CJ673_03425 | thiD | GCA_001572855_01770 | GCA_001572855_01897 | Unannotated protein. | Unannotated protein. | 0.857 |
CJ673_03425 | thiG | GCA_001572855_01770 | GCA_001572855_01577 | Unannotated protein. | Unannotated protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.998 |
CJ673_03425 | thiL | GCA_001572855_01770 | GCA_001572855_00763 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.544 |
CJ673_03425 | thiM | GCA_001572855_01770 | GCA_001572855_00957 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.621 |
CJ673_06670 | CJ673_01360 | GCA_001572855_01755 | GCA_001572855_00707 | Unannotated protein. | Unannotated protein. | 0.860 |
CJ673_06670 | CJ673_03425 | GCA_001572855_01755 | GCA_001572855_01770 | Unannotated protein. | Unannotated protein. | 0.823 |
page 1 of 4