Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CJ673_01345 | guaA | GCA_001572855_00710 | GCA_001572855_01227 | Unannotated protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.562 |
CJ673_01345 | panC | GCA_001572855_00710 | GCA_001572855_00978 | Unannotated protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Unannotated protein; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.619 |
CJ673_01870 | CJ673_08025 | GCA_001572855_01995 | GCA_001572855_01447 | Unannotated protein. | Unannotated protein. | 0.585 |
CJ673_01870 | bioA | GCA_001572855_01995 | GCA_001572855_02013 | Unannotated protein. | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.463 |
CJ673_01870 | coaBC | GCA_001572855_01995 | GCA_001572855_01684 | Unannotated protein. | Unannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.526 |
CJ673_01870 | guaA | GCA_001572855_01995 | GCA_001572855_01227 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.556 |
CJ673_01870 | panC | GCA_001572855_01995 | GCA_001572855_00978 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.683 |
CJ673_03020 | guaA | GCA_001572855_00979 | GCA_001572855_01227 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.840 |
CJ673_03020 | panC | GCA_001572855_00979 | GCA_001572855_00978 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.701 |
CJ673_08025 | CJ673_01870 | GCA_001572855_01447 | GCA_001572855_01995 | Unannotated protein. | Unannotated protein. | 0.585 |
CJ673_08025 | coaBC | GCA_001572855_01447 | GCA_001572855_01684 | Unannotated protein. | Unannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.828 |
CJ673_08025 | panC | GCA_001572855_01447 | GCA_001572855_00978 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.992 |
CJ673_08025 | panD | GCA_001572855_01447 | GCA_001572855_00546 | Unannotated protein. | Unannotated protein; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.684 |
bioA | CJ673_01870 | GCA_001572855_02013 | GCA_001572855_01995 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein. | 0.463 |
bioA | panB | GCA_001572855_02013 | GCA_001572855_00627 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | 0.534 |
bioA | panC | GCA_001572855_02013 | GCA_001572855_00978 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.636 |
bioA | panD | GCA_001572855_02013 | GCA_001572855_00546 | Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Unannotated protein; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.541 |
coaBC | CJ673_01870 | GCA_001572855_01684 | GCA_001572855_01995 | Unannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Unannotated protein. | 0.526 |
coaBC | CJ673_08025 | GCA_001572855_01684 | GCA_001572855_01447 | Unannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Unannotated protein. | 0.828 |
coaBC | panB | GCA_001572855_01684 | GCA_001572855_00627 | Unannotated protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Unannotated protein; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | 0.563 |
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