Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CJ669_04545 | CJ673_05540 | GCA_001572855_01298 | GCA_001572855_01295 | Unannotated protein. | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.705 |
CJ669_04545 | CJ673_05545 | GCA_001572855_01298 | GCA_001572855_01296 | Unannotated protein. | Unannotated protein. | 0.773 |
CJ669_04545 | ilvB | GCA_001572855_01298 | GCA_001572855_01299 | Unannotated protein. | Unannotated protein. | 0.999 |
CJ669_04545 | lpxD | GCA_001572855_01298 | GCA_001572855_01297 | Unannotated protein. | Unannotated protein; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.800 |
CJ673_05540 | CJ669_04545 | GCA_001572855_01295 | GCA_001572855_01298 | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Unannotated protein. | 0.705 |
CJ673_05540 | CJ673_05545 | GCA_001572855_01295 | GCA_001572855_01296 | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Unannotated protein. | 0.705 |
CJ673_05540 | CJ673_05955 | GCA_001572855_01295 | GCA_001572855_00099 | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.503 |
CJ673_05540 | CJ673_06090 | GCA_001572855_01295 | GCA_001572855_00077 | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.496 |
CJ673_05540 | CJ673_06610 | GCA_001572855_01295 | GCA_001572855_01743 | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.498 |
CJ673_05540 | CJ673_09005 | GCA_001572855_01295 | GCA_001572855_01177 | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Unannotated protein. | 0.806 |
CJ673_05540 | GCA_001572855_00683 | GCA_001572855_01295 | GCA_001572855_00683 | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Unannotated protein. | 0.499 |
CJ673_05540 | GCA_001572855_01612 | GCA_001572855_01295 | GCA_001572855_01612 | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Unannotated protein. | 0.499 |
CJ673_05540 | ilvB | GCA_001572855_01295 | GCA_001572855_01299 | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Unannotated protein. | 0.707 |
CJ673_05540 | lpxD | GCA_001572855_01295 | GCA_001572855_01297 | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Unannotated protein; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.705 |
CJ673_05545 | CJ669_04545 | GCA_001572855_01296 | GCA_001572855_01298 | Unannotated protein. | Unannotated protein. | 0.773 |
CJ673_05545 | CJ673_05540 | GCA_001572855_01296 | GCA_001572855_01295 | Unannotated protein. | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.705 |
CJ673_05545 | ilvB | GCA_001572855_01296 | GCA_001572855_01299 | Unannotated protein. | Unannotated protein. | 0.773 |
CJ673_05545 | lpxD | GCA_001572855_01296 | GCA_001572855_01297 | Unannotated protein. | Unannotated protein; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.773 |
CJ673_05955 | CJ673_05540 | GCA_001572855_00099 | GCA_001572855_01295 | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.503 |
CJ673_05955 | CJ673_06090 | GCA_001572855_00099 | GCA_001572855_00077 | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.426 |
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