STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJ673_08775Unannotated protein. (238 aa)    
Predicted Functional Partners:
CJ673_02165
Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.788
CJ673_05215
Unannotated protein.
    
 0.785
CJ673_05230
Unannotated protein.
  
 
 0.782
rsfS
Unannotated protein.
  
 
 0.781
GCA_001572855_01901
Unannotated protein.
       0.773
CJ673_01685
Unannotated protein; Belongs to the arginase family.
  
 0.757
GCA_001572855_00693
Unannotated protein.
    
  0.746
CJ673_05805
Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate.
   
 0.741
CJ673_00750
Unannotated protein.
   
 0.741
oorC
Unannotated protein.
  
  
  0.733
Your Current Organism:
Arcobacter cryaerophilus
NCBI taxonomy Id: 28198
Other names: A. cryaerophilus, ATCC 43158, Aliiarcobacter cryaerophilus, Arcibacter cryaerophilus, Arcobacter sp. LMG 10210, Arcobacter sp. LMG 10229, Arcobacter sp. LMG 9065, Arcobacter sp. LMG 9861, Arcobacter sp. LMG 9871, Arquibacter cryaerophilus, CCUG 17801, CIP 104014, Campylobacter cryaerophila, Campylobacter cryaerophilus, DSM 7289, LMG 24291, LMG 7536, LMG 9904, LMG:24291, LMG:7536, LMG:9904, NCTC 11885, strain 02766, strain A 169/B, strain A169/B, strain Neill A 169/B, strain Neill A1691B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.