STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF188_07630Unannotated protein. (519 aa)    
Predicted Functional Partners:
DF188_07635
Unannotated protein.
 
     0.917
DF188_07625
Unannotated protein.
 
     0.828
DF188_07100
Unannotated protein.
 
 
 0.813
DF188_07640
Unannotated protein.
       0.775
GCA_001572935_00368
Unannotated protein.
 
     0.673
DF188_02675
Unannotated protein.
  
 
   0.668
DF188_08360
Unannotated protein.
  
 
   0.647
DF188_02555
Unannotated protein.
  
 
 
 0.626
DF188_04165
Unannotated protein; Required for flagellar hook formation. May act as a scaffolding protein.
  
    0.553
DF188_01275
Unannotated protein.
 
 
   0.544
Your Current Organism:
Arcobacter skirrowii
NCBI taxonomy Id: 28200
Other names: A. skirrowii, ATCC 51132, Aliiarcobacter skirrowii, CCUG 10374, CIP 103538, CIP 103588, DSM 7302, LMG 6621, LMG:6621, NCTC 12713, strain Skirrow 449/80
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.