Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DF188_01420 | DF188_01425 | GCA_001572935_00772 | GCA_001572935_00773 | Unannotated protein. | Unannotated protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
DF188_01420 | DF188_01650 | GCA_001572935_00772 | GCA_001572935_00817 | Unannotated protein. | Unannotated protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.910 |
DF188_01420 | DF188_09405 | GCA_001572935_00772 | GCA_001572935_01788 | Unannotated protein. | Unannotated protein. | 0.952 |
DF188_01420 | NapG | GCA_001572935_00772 | GCA_001572935_00716 | Unannotated protein. | Unannotated protein. | 0.968 |
DF188_01420 | ccoN | GCA_001572935_00772 | GCA_001572935_00820 | Unannotated protein. | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | 0.533 |
DF188_01420 | ccoO | GCA_001572935_00772 | GCA_001572935_00819 | Unannotated protein. | Unannotated protein. | 0.659 |
DF188_01425 | DF188_01420 | GCA_001572935_00773 | GCA_001572935_00772 | Unannotated protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Unannotated protein. | 0.999 |
DF188_01425 | DF188_01650 | GCA_001572935_00773 | GCA_001572935_00817 | Unannotated protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Unannotated protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.949 |
DF188_01425 | DF188_09405 | GCA_001572935_00773 | GCA_001572935_01788 | Unannotated protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Unannotated protein. | 0.953 |
DF188_01425 | NapG | GCA_001572935_00773 | GCA_001572935_00716 | Unannotated protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Unannotated protein. | 0.928 |
DF188_01425 | ccoN | GCA_001572935_00773 | GCA_001572935_00820 | Unannotated protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | 0.667 |
DF188_01425 | ccoO | GCA_001572935_00773 | GCA_001572935_00819 | Unannotated protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Unannotated protein. | 0.639 |
DF188_01645 | DF188_01650 | GCA_001572935_00816 | GCA_001572935_00817 | Unannotated protein. | Unannotated protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.807 |
DF188_01645 | DF188_01655 | GCA_001572935_00816 | GCA_001572935_00818 | Unannotated protein. | Unannotated protein. | 0.804 |
DF188_01645 | ccoN | GCA_001572935_00816 | GCA_001572935_00820 | Unannotated protein. | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | 0.786 |
DF188_01645 | ccoO | GCA_001572935_00816 | GCA_001572935_00819 | Unannotated protein. | Unannotated protein. | 0.799 |
DF188_01650 | DF188_01420 | GCA_001572935_00817 | GCA_001572935_00772 | Unannotated protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | Unannotated protein. | 0.910 |
DF188_01650 | DF188_01425 | GCA_001572935_00817 | GCA_001572935_00773 | Unannotated protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | Unannotated protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.949 |
DF188_01650 | DF188_01645 | GCA_001572935_00817 | GCA_001572935_00816 | Unannotated protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | Unannotated protein. | 0.807 |
DF188_01650 | DF188_01655 | GCA_001572935_00817 | GCA_001572935_00818 | Unannotated protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | Unannotated protein. | 0.989 |
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