node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DF188_01675 | DF188_01685 | GCA_001572935_00822 | GCA_001572935_00824 | Unannotated protein. | Unannotated protein. | 0.804 |
DF188_01675 | smpB | GCA_001572935_00822 | GCA_001572935_00821 | Unannotated protein. | Unannotated protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.804 |
DF188_01675 | truB | GCA_001572935_00822 | GCA_001572935_00823 | Unannotated protein. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.810 |
DF188_01685 | DF188_01675 | GCA_001572935_00824 | GCA_001572935_00822 | Unannotated protein. | Unannotated protein. | 0.804 |
DF188_01685 | rpoB | GCA_001572935_00824 | GCA_001572935_01451 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.827 |
DF188_01685 | rpoC | GCA_001572935_00824 | GCA_001572935_01452 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.837 |
DF188_01685 | smpB | GCA_001572935_00824 | GCA_001572935_00821 | Unannotated protein. | Unannotated protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.804 |
DF188_01685 | truB | GCA_001572935_00824 | GCA_001572935_00823 | Unannotated protein. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.836 |
guaA | infB | GCA_001572935_00389 | GCA_001572935_00797 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.708 |
guaA | nusA | GCA_001572935_00389 | GCA_001572935_01074 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Participates in both transcription termination and antitermination. | 0.542 |
guaA | rpoB | GCA_001572935_00389 | GCA_001572935_01451 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
guaA | rpoC | GCA_001572935_00389 | GCA_001572935_01452 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
guaA | smpB | GCA_001572935_00389 | GCA_001572935_00821 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.495 |
guaA | trmB | GCA_001572935_00389 | GCA_001572935_01845 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.417 |
guaA | truB | GCA_001572935_00389 | GCA_001572935_00823 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.944 |
infB | guaA | GCA_001572935_00797 | GCA_001572935_00389 | Unannotated protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.708 |
infB | nusA | GCA_001572935_00797 | GCA_001572935_01074 | Unannotated protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Unannotated protein; Participates in both transcription termination and antitermination. | 0.953 |
infB | rbfA | GCA_001572935_00797 | GCA_001572935_00796 | Unannotated protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Unannotated protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.985 |
infB | rpoB | GCA_001572935_00797 | GCA_001572935_01451 | Unannotated protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
infB | rpoC | GCA_001572935_00797 | GCA_001572935_01452 | Unannotated protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |