STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF188_01875Unannotated protein. (393 aa)    
Predicted Functional Partners:
DF188_01870
Unannotated protein; Belongs to the P(II) protein family.
 
 0.999
DF188_09870
Unannotated protein.
      0.703
DF188_06725
Unannotated protein.
    
 0.682
DF188_07100
Unannotated protein.
 
 0.656
pyrC
Unannotated protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
       0.603
glnA
Unannotated protein; Belongs to the glutamine synthetase family.
  
  
 0.586
DF188_01880
Unannotated protein.
  
 
 0.522
DF188_01930
Unannotated protein.
 
   
 0.511
DF188_07455
Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
 
 0.507
DF188_03295
Unannotated protein.
      0.507
Your Current Organism:
Arcobacter skirrowii
NCBI taxonomy Id: 28200
Other names: A. skirrowii, ATCC 51132, Aliiarcobacter skirrowii, CCUG 10374, CIP 103538, CIP 103588, DSM 7302, LMG 6621, LMG:6621, NCTC 12713, strain Skirrow 449/80
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.