STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF188_01920Unannotated protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (133 aa)    
Predicted Functional Partners:
DF188_01915
Unannotated protein.
  
  
 0.866
DF188_01910
Unannotated protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.
     
 0.864
DF188_01905
Unannotated protein.
  
  
 0.815
DF188_01900
Unannotated protein.
  
  
 0.804
ChrA
Unannotated protein.
     
 0.786
tkt
Unannotated protein; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
   0.588
DF188_00760
Unannotated protein.
  
 
 0.558
trxA
Unannotated protein; Belongs to the thioredoxin family.
  
 
 0.558
DF188_03315
Unannotated protein; Belongs to the thioredoxin family.
  
 
 0.558
acpP
Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.555
Your Current Organism:
Arcobacter skirrowii
NCBI taxonomy Id: 28200
Other names: A. skirrowii, ATCC 51132, Aliiarcobacter skirrowii, CCUG 10374, CIP 103538, CIP 103588, DSM 7302, LMG 6621, LMG:6621, NCTC 12713, strain Skirrow 449/80
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.