Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DF188_00050 | fur | GCA_001572935_00892 | GCA_001572935_00891 | Unannotated protein. | Unannotated protein; Belongs to the Fur family. | 0.516 |
DF188_00050 | mviN | GCA_001572935_00892 | GCA_001572935_00893 | Unannotated protein. | Unannotated protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.775 |
DF188_03315 | DF188_07100 | GCA_001572935_01138 | GCA_001572935_01415 | Unannotated protein; Belongs to the thioredoxin family. | Unannotated protein. | 0.505 |
DF188_03315 | fur | GCA_001572935_01138 | GCA_001572935_00891 | Unannotated protein; Belongs to the thioredoxin family. | Unannotated protein; Belongs to the Fur family. | 0.428 |
DF188_03925 | DF188_07100 | GCA_001572935_00524 | GCA_001572935_01415 | Unannotated protein. | Unannotated protein. | 0.457 |
DF188_03925 | fur | GCA_001572935_00524 | GCA_001572935_00891 | Unannotated protein. | Unannotated protein; Belongs to the Fur family. | 0.664 |
DF188_03925 | rpoB | GCA_001572935_00524 | GCA_001572935_01451 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.471 |
DF188_03925 | rpoC | GCA_001572935_00524 | GCA_001572935_01452 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.471 |
DF188_07100 | DF188_03315 | GCA_001572935_01415 | GCA_001572935_01138 | Unannotated protein. | Unannotated protein; Belongs to the thioredoxin family. | 0.505 |
DF188_07100 | DF188_03925 | GCA_001572935_01415 | GCA_001572935_00524 | Unannotated protein. | Unannotated protein. | 0.457 |
DF188_07100 | fur | GCA_001572935_01415 | GCA_001572935_00891 | Unannotated protein. | Unannotated protein; Belongs to the Fur family. | 0.454 |
DF188_07100 | mviN | GCA_001572935_01415 | GCA_001572935_00893 | Unannotated protein. | Unannotated protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.418 |
DF188_07100 | polA | GCA_001572935_01415 | GCA_001572935_01922 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.647 |
DF188_07100 | rpoB | GCA_001572935_01415 | GCA_001572935_01451 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.686 |
DF188_07100 | rpoC | GCA_001572935_01415 | GCA_001572935_01452 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.686 |
DF188_07100 | trxA | GCA_001572935_01415 | GCA_001572935_01098 | Unannotated protein. | Unannotated protein; Belongs to the thioredoxin family. | 0.505 |
fur | DF188_00050 | GCA_001572935_00891 | GCA_001572935_00892 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.516 |
fur | DF188_03315 | GCA_001572935_00891 | GCA_001572935_01138 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; Belongs to the thioredoxin family. | 0.428 |
fur | DF188_03925 | GCA_001572935_00891 | GCA_001572935_00524 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.664 |
fur | DF188_07100 | GCA_001572935_00891 | GCA_001572935_01415 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.454 |
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