Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DF188_00285 | DF188_05680 | GCA_001572935_01494 | GCA_001572935_01032 | Unannotated protein. | Unannotated protein. | 0.619 |
DF188_00285 | bamA | GCA_001572935_01494 | GCA_001572935_00214 | Unannotated protein. | Unannotated protein. | 0.785 |
DF188_00285 | tolB | GCA_001572935_01494 | GCA_001572935_01493 | Unannotated protein. | Unannotated protein. | 0.972 |
DF188_04480 | DF188_05670 | GCA_001572935_00938 | GCA_001572935_01030 | Unannotated protein. | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.714 |
DF188_04480 | DF188_05680 | GCA_001572935_00938 | GCA_001572935_01032 | Unannotated protein. | Unannotated protein. | 0.933 |
DF188_05670 | DF188_04480 | GCA_001572935_01030 | GCA_001572935_00938 | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Unannotated protein. | 0.714 |
DF188_05670 | DF188_05680 | GCA_001572935_01030 | GCA_001572935_01032 | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Unannotated protein. | 0.971 |
DF188_05670 | DF188_06265 | GCA_001572935_01030 | GCA_001572935_01846 | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Unannotated protein. | 0.714 |
DF188_05670 | DF188_06935 | GCA_001572935_01030 | GCA_001572935_01377 | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Unannotated protein. | 0.714 |
DF188_05670 | secA | GCA_001572935_01030 | GCA_001572935_01031 | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.672 |
DF188_05670 | tolB | GCA_001572935_01030 | GCA_001572935_01493 | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Unannotated protein. | 0.448 |
DF188_05680 | DF188_00285 | GCA_001572935_01032 | GCA_001572935_01494 | Unannotated protein. | Unannotated protein. | 0.619 |
DF188_05680 | DF188_04480 | GCA_001572935_01032 | GCA_001572935_00938 | Unannotated protein. | Unannotated protein. | 0.933 |
DF188_05680 | DF188_05670 | GCA_001572935_01032 | GCA_001572935_01030 | Unannotated protein. | Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.971 |
DF188_05680 | DF188_06265 | GCA_001572935_01032 | GCA_001572935_01846 | Unannotated protein. | Unannotated protein. | 0.910 |
DF188_05680 | DF188_06935 | GCA_001572935_01032 | GCA_001572935_01377 | Unannotated protein. | Unannotated protein. | 0.915 |
DF188_05680 | DF188_09540 | GCA_001572935_01032 | GCA_001572935_00432 | Unannotated protein. | Unannotated protein. | 0.512 |
DF188_05680 | bamA | GCA_001572935_01032 | GCA_001572935_00214 | Unannotated protein. | Unannotated protein. | 0.760 |
DF188_05680 | lspA | GCA_001572935_01032 | GCA_001572935_01595 | Unannotated protein. | Unannotated protein; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.467 |
DF188_05680 | secA | GCA_001572935_01032 | GCA_001572935_01031 | Unannotated protein. | Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.813 |
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