Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DF188_06820 | DF188_06825 | GCA_001572935_01318 | GCA_001572935_01319 | Unannotated protein. | Unannotated protein. | 0.804 |
DF188_06820 | DF188_06830 | GCA_001572935_01318 | GCA_001572935_01320 | Unannotated protein. | Unannotated protein. | 0.775 |
DF188_06820 | DF188_07910 | GCA_001572935_01318 | GCA_001572935_01316 | Unannotated protein. | Unannotated protein. | 0.718 |
DF188_06820 | DF188_07920 | GCA_001572935_01318 | GCA_001572935_01314 | Unannotated protein. | Unannotated protein. | 0.407 |
DF188_06820 | aroE | GCA_001572935_01318 | GCA_001572935_01317 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.718 |
DF188_06820 | brnQ | GCA_001572935_01318 | GCA_001572935_01311 | Unannotated protein. | Unannotated protein; Component of the transport system for branched-chain amino acids. | 0.405 |
DF188_06820 | pgeF | GCA_001572935_01318 | GCA_001572935_01315 | Unannotated protein. | Unannotated protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.521 |
DF188_06820 | purU | GCA_001572935_01318 | GCA_001572935_01313 | Unannotated protein. | Unannotated protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | 0.405 |
DF188_06820 | trmL | GCA_001572935_01318 | GCA_001572935_01312 | Unannotated protein. | Unannotated protein; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | 0.405 |
DF188_06825 | DF188_06820 | GCA_001572935_01319 | GCA_001572935_01318 | Unannotated protein. | Unannotated protein. | 0.804 |
DF188_06825 | DF188_06830 | GCA_001572935_01319 | GCA_001572935_01320 | Unannotated protein. | Unannotated protein. | 0.775 |
DF188_06825 | DF188_07910 | GCA_001572935_01319 | GCA_001572935_01316 | Unannotated protein. | Unannotated protein. | 0.718 |
DF188_06825 | DF188_07920 | GCA_001572935_01319 | GCA_001572935_01314 | Unannotated protein. | Unannotated protein. | 0.407 |
DF188_06825 | aroE | GCA_001572935_01319 | GCA_001572935_01317 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.718 |
DF188_06825 | brnQ | GCA_001572935_01319 | GCA_001572935_01311 | Unannotated protein. | Unannotated protein; Component of the transport system for branched-chain amino acids. | 0.405 |
DF188_06825 | pgeF | GCA_001572935_01319 | GCA_001572935_01315 | Unannotated protein. | Unannotated protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.585 |
DF188_06825 | purU | GCA_001572935_01319 | GCA_001572935_01313 | Unannotated protein. | Unannotated protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | 0.405 |
DF188_06825 | trmL | GCA_001572935_01319 | GCA_001572935_01312 | Unannotated protein. | Unannotated protein; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | 0.405 |
DF188_06830 | DF188_06820 | GCA_001572935_01320 | GCA_001572935_01318 | Unannotated protein. | Unannotated protein. | 0.775 |
DF188_06830 | DF188_06825 | GCA_001572935_01320 | GCA_001572935_01319 | Unannotated protein. | Unannotated protein. | 0.775 |
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