STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aspAUnannotated protein. (468 aa)    
Predicted Functional Partners:
DF188_00255
Unannotated protein.
  
 
 0.991
DF188_07495
Unannotated protein.
 
   
 0.942
argH
Unannotated protein.
     
 0.937
DF188_07480
Unannotated protein.
    
 0.908
pckA
Unannotated protein; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
   
 
 0.907
purA
Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.903
DF188_02830
Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.903
pyrB
Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
  0.900
DF188_02755
Unannotated protein.
     
  0.900
argG
Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
 0.874
Your Current Organism:
Arcobacter skirrowii
NCBI taxonomy Id: 28200
Other names: A. skirrowii, ATCC 51132, Aliiarcobacter skirrowii, CCUG 10374, CIP 103538, CIP 103588, DSM 7302, LMG 6621, LMG:6621, NCTC 12713, strain Skirrow 449/80
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.