STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001572935_01553Unannotated protein. (256 aa)    
Predicted Functional Partners:
DF188_09095
Unannotated protein.
 
  
 0.863
DF188_09075
Unannotated protein.
 
  
 0.855
GCA_001572935_01552
Unannotated protein.
       0.786
GCA_001572935_01555
Unannotated protein.
  
 
 0.786
GCA_001572935_01556
Unannotated protein.
  
  
 0.749
GCA_001572935_01550
Unannotated protein.
 
  
 0.620
GCA_001572935_01549
Unannotated protein.
  
  
 0.556
GCA_001572935_01551
Unannotated protein.
     
 0.549
GCA_001572935_00121
Unannotated protein.
 
  
 0.537
DF188_05275
Unannotated protein; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.480
Your Current Organism:
Arcobacter skirrowii
NCBI taxonomy Id: 28200
Other names: A. skirrowii, ATCC 51132, Aliiarcobacter skirrowii, CCUG 10374, CIP 103538, CIP 103588, DSM 7302, LMG 6621, LMG:6621, NCTC 12713, strain Skirrow 449/80
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.