Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF78535.1 | araB_1 | SAMN04488517_101176 | SAMN04488517_101179 | TRAP-type C4-dicarboxylate transport system, small permease component. | Sugar lactone lactonase YvrE. | 0.416 |
SFF78535.1 | gabD | SAMN04488517_101176 | SAMN04488517_101172 | TRAP-type C4-dicarboxylate transport system, small permease component. | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.532 |
SFF78535.1 | galM | SAMN04488517_101176 | SAMN04488517_101173 | TRAP-type C4-dicarboxylate transport system, small permease component. | Aldose 1-epimerase. | 0.532 |
SFF78535.1 | siaT_2 | SAMN04488517_101176 | SAMN04488517_101175 | TRAP-type C4-dicarboxylate transport system, small permease component. | TRAP transporter, DctM subunit. | 0.930 |
SFF78535.1 | yiaO_1 | SAMN04488517_101176 | SAMN04488517_101174 | TRAP-type C4-dicarboxylate transport system, small permease component. | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | 0.937 |
araB_1 | SFF78535.1 | SAMN04488517_101179 | SAMN04488517_101176 | Sugar lactone lactonase YvrE. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.416 |
araB_1 | galM | SAMN04488517_101179 | SAMN04488517_101173 | Sugar lactone lactonase YvrE. | Aldose 1-epimerase. | 0.647 |
gabD | SFF78535.1 | SAMN04488517_101172 | SAMN04488517_101176 | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.532 |
gabD | galM | SAMN04488517_101172 | SAMN04488517_101173 | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Aldose 1-epimerase. | 0.784 |
gabD | siaT_2 | SAMN04488517_101172 | SAMN04488517_101175 | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | TRAP transporter, DctM subunit. | 0.557 |
gabD | yiaO_1 | SAMN04488517_101172 | SAMN04488517_101174 | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | 0.586 |
galM | SFF78535.1 | SAMN04488517_101173 | SAMN04488517_101176 | Aldose 1-epimerase. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.532 |
galM | araB_1 | SAMN04488517_101173 | SAMN04488517_101179 | Aldose 1-epimerase. | Sugar lactone lactonase YvrE. | 0.647 |
galM | gabD | SAMN04488517_101173 | SAMN04488517_101172 | Aldose 1-epimerase. | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.784 |
galM | siaT_2 | SAMN04488517_101173 | SAMN04488517_101175 | Aldose 1-epimerase. | TRAP transporter, DctM subunit. | 0.532 |
galM | yiaO_1 | SAMN04488517_101173 | SAMN04488517_101174 | Aldose 1-epimerase. | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | 0.586 |
siaT_2 | SFF78535.1 | SAMN04488517_101175 | SAMN04488517_101176 | TRAP transporter, DctM subunit. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.930 |
siaT_2 | gabD | SAMN04488517_101175 | SAMN04488517_101172 | TRAP transporter, DctM subunit. | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.557 |
siaT_2 | galM | SAMN04488517_101175 | SAMN04488517_101173 | TRAP transporter, DctM subunit. | Aldose 1-epimerase. | 0.532 |
siaT_2 | yiaO_1 | SAMN04488517_101175 | SAMN04488517_101174 | TRAP transporter, DctM subunit. | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | 0.929 |
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