STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF90101.1Acetyl-CoA acetyltransferase. (383 aa)    
Predicted Functional Partners:
SFF90076.1
Hypothetical protein.
 0.999
fadJ_2
Short chain enoyl-CoA hydratase.
  
 0.996
fadJ_1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.996
SFF90144.1
N-terminal half of MaoC dehydratase.
 
 0.969
SFF90117.1
6-carboxyhexanoate-CoA ligase.
 
 
  0.956
echA8_1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.931
SFF89988.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
  0.888
mmgB
3-hydroxyacyl-CoA dehydrogenase.
  
 0.850
lcdH_2
3-hydroxyacyl-CoA dehydrogenase.
   
  0.840
SFF90012.1
Transcriptional regulator, IclR family.
 
 
  0.823
Your Current Organism:
Jannaschia rubra
NCBI taxonomy Id: 282197
Other names: CECT 5088, DSM 16279, J. rubra, Jannaschia rubra Macian et al. 2005, strain 4SM3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.