Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF78116.1 | prcA | SAMN04488517_101150 | SAMN04488517_10219 | Surfeit locus 1 family protein. | Hemolysin-type calcium-binding repeat-containing protein. | 0.849 |
SFF78116.1 | secY | SAMN04488517_101150 | SAMN04488517_105131 | Surfeit locus 1 family protein. | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.836 |
SFG05627.1 | SFG22612.1 | SAMN04488517_102477 | SAMN04488517_103219 | Hint domain-containing protein. | Leishmanolysin. | 0.430 |
SFG05627.1 | SFG27431.1 | SAMN04488517_102477 | SAMN04488517_103419 | Hint domain-containing protein. | Hint domain-containing protein. | 0.846 |
SFG05627.1 | SFG79545.1 | SAMN04488517_102477 | SAMN04488517_11610 | Hint domain-containing protein. | Hypothetical protein. | 0.430 |
SFG05627.1 | SFG80764.1 | SAMN04488517_102477 | SAMN04488517_11723 | Hint domain-containing protein. | Right handed beta helix region. | 0.449 |
SFG05627.1 | prcA | SAMN04488517_102477 | SAMN04488517_10219 | Hint domain-containing protein. | Hemolysin-type calcium-binding repeat-containing protein. | 0.996 |
SFG22612.1 | SFG05627.1 | SAMN04488517_103219 | SAMN04488517_102477 | Leishmanolysin. | Hint domain-containing protein. | 0.430 |
SFG22612.1 | SFG80764.1 | SAMN04488517_103219 | SAMN04488517_11723 | Leishmanolysin. | Right handed beta helix region. | 0.468 |
SFG22612.1 | cya_2 | SAMN04488517_103219 | SAMN04488517_10732 | Leishmanolysin. | Ca2+-binding protein, RTX toxin-related. | 0.430 |
SFG22612.1 | prcA | SAMN04488517_103219 | SAMN04488517_10219 | Leishmanolysin. | Hemolysin-type calcium-binding repeat-containing protein. | 0.864 |
SFG22612.1 | prtB | SAMN04488517_103219 | SAMN04488517_1128 | Leishmanolysin. | Serralysin. | 0.430 |
SFG27431.1 | SFG05627.1 | SAMN04488517_103419 | SAMN04488517_102477 | Hint domain-containing protein. | Hint domain-containing protein. | 0.846 |
SFG27431.1 | SFG80764.1 | SAMN04488517_103419 | SAMN04488517_11723 | Hint domain-containing protein. | Right handed beta helix region. | 0.468 |
SFG27431.1 | cya_2 | SAMN04488517_103419 | SAMN04488517_10732 | Hint domain-containing protein. | Ca2+-binding protein, RTX toxin-related. | 0.527 |
SFG27431.1 | prcA | SAMN04488517_103419 | SAMN04488517_10219 | Hint domain-containing protein. | Hemolysin-type calcium-binding repeat-containing protein. | 0.864 |
SFG27431.1 | prtB | SAMN04488517_103419 | SAMN04488517_1128 | Hint domain-containing protein. | Serralysin. | 0.527 |
SFG79545.1 | SFG05627.1 | SAMN04488517_11610 | SAMN04488517_102477 | Hypothetical protein. | Hint domain-containing protein. | 0.430 |
SFG79545.1 | SFG80764.1 | SAMN04488517_11610 | SAMN04488517_11723 | Hypothetical protein. | Right handed beta helix region. | 0.468 |
SFG79545.1 | cya_2 | SAMN04488517_11610 | SAMN04488517_10732 | Hypothetical protein. | Ca2+-binding protein, RTX toxin-related. | 0.430 |
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