STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG25965.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
SFG25937.1
Magnesium transporter; Acts as a magnesium transporter.
       0.572
SFG25986.1
Hypothetical protein.
       0.546
dps2
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
       0.423
SFG25862.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
       0.400
SFG25892.1
Cytochrome c, mono-and diheme variants.
       0.400
SFG25916.1
Monoamine oxidase.
       0.400
Your Current Organism:
Jannaschia rubra
NCBI taxonomy Id: 282197
Other names: CECT 5088, DSM 16279, J. rubra, Jannaschia rubra Macian et al. 2005, strain 4SM3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.