Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG22000.1 | barA | SAMN04488517_103193 | SAMN04488517_102296 | Signal transduction histidine kinase. | Hypothetical protein. | 0.999 |
SFG22000.1 | kefA_2 | SAMN04488517_103193 | SAMN04488517_10783 | Signal transduction histidine kinase. | Small-conductance mechanosensitive channel. | 0.513 |
SFG22000.1 | putA | SAMN04488517_103193 | SAMN04488517_10252 | Signal transduction histidine kinase. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.459 |
SFG22000.1 | putP | SAMN04488517_103193 | SAMN04488517_10781 | Signal transduction histidine kinase. | solute:Na+ symporter, SSS family; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.851 |
alaS_2 | cysK | SAMN04488517_10782 | SAMN04488517_10784 | Ala-tRNA(Pro) hydrolase. | Cysteine synthase A. | 0.819 |
alaS_2 | kefA_2 | SAMN04488517_10782 | SAMN04488517_10783 | Ala-tRNA(Pro) hydrolase. | Small-conductance mechanosensitive channel. | 0.816 |
alaS_2 | putP | SAMN04488517_10782 | SAMN04488517_10781 | Ala-tRNA(Pro) hydrolase. | solute:Na+ symporter, SSS family; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.509 |
apt | putP | SAMN04488517_101145 | SAMN04488517_10781 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | solute:Na+ symporter, SSS family; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.576 |
barA | SFG22000.1 | SAMN04488517_102296 | SAMN04488517_103193 | Hypothetical protein. | Signal transduction histidine kinase. | 0.999 |
barA | gltA | SAMN04488517_102296 | SAMN04488517_10780 | Hypothetical protein. | Citrate synthase; Belongs to the citrate synthase family. | 0.451 |
barA | putA | SAMN04488517_102296 | SAMN04488517_10252 | Hypothetical protein. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.451 |
barA | putP | SAMN04488517_102296 | SAMN04488517_10781 | Hypothetical protein. | solute:Na+ symporter, SSS family; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.580 |
cysK | alaS_2 | SAMN04488517_10784 | SAMN04488517_10782 | Cysteine synthase A. | Ala-tRNA(Pro) hydrolase. | 0.819 |
cysK | kefA_2 | SAMN04488517_10784 | SAMN04488517_10783 | Cysteine synthase A. | Small-conductance mechanosensitive channel. | 0.791 |
cysK | putA | SAMN04488517_10784 | SAMN04488517_10252 | Cysteine synthase A. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.414 |
cysK | putP | SAMN04488517_10784 | SAMN04488517_10781 | Cysteine synthase A. | solute:Na+ symporter, SSS family; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.509 |
gltA | barA | SAMN04488517_10780 | SAMN04488517_102296 | Citrate synthase; Belongs to the citrate synthase family. | Hypothetical protein. | 0.451 |
gltA | putA | SAMN04488517_10780 | SAMN04488517_10252 | Citrate synthase; Belongs to the citrate synthase family. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.744 |
gltA | putP | SAMN04488517_10780 | SAMN04488517_10781 | Citrate synthase; Belongs to the citrate synthase family. | solute:Na+ symporter, SSS family; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.556 |
gltA | pxpA | SAMN04488517_10780 | SAMN04488517_10725 | Citrate synthase; Belongs to the citrate synthase family. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.637 |
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