Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG64273.1 | SFG64316.1 | SAMN04488517_10914 | SAMN04488517_10916 | Peptide/nickel transport system substrate-binding protein. | Glucose/arabinose dehydrogenase, beta-propeller fold. | 0.432 |
SFG64273.1 | cc4 | SAMN04488517_10914 | SAMN04488517_10915 | Peptide/nickel transport system substrate-binding protein. | Cytochrome c553. | 0.432 |
SFG64316.1 | SFG64273.1 | SAMN04488517_10916 | SAMN04488517_10914 | Glucose/arabinose dehydrogenase, beta-propeller fold. | Peptide/nickel transport system substrate-binding protein. | 0.432 |
SFG64316.1 | cc4 | SAMN04488517_10916 | SAMN04488517_10915 | Glucose/arabinose dehydrogenase, beta-propeller fold. | Cytochrome c553. | 0.957 |
cc4 | SFG64273.1 | SAMN04488517_10915 | SAMN04488517_10914 | Cytochrome c553. | Peptide/nickel transport system substrate-binding protein. | 0.432 |
cc4 | SFG64316.1 | SAMN04488517_10915 | SAMN04488517_10916 | Cytochrome c553. | Glucose/arabinose dehydrogenase, beta-propeller fold. | 0.957 |