Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF99510.1 | SFF99589.1 | SAMN04488517_102168 | SAMN04488517_102171 | Type VI secretion system protein ImpJ. | Type VI secretion protein IcmF. | 0.969 |
SFF99510.1 | SFG79796.1 | SAMN04488517_102168 | SAMN04488517_11622 | Type VI secretion system protein ImpJ. | Hypothetical protein. | 0.514 |
SFF99510.1 | prkC | SAMN04488517_102168 | SAMN04488517_102174 | Type VI secretion system protein ImpJ. | Serine/threonine protein kinase. | 0.933 |
SFF99510.1 | pstP_1 | SAMN04488517_102168 | SAMN04488517_11623 | Type VI secretion system protein ImpJ. | Protein phosphatase. | 0.668 |
SFF99589.1 | SFF99510.1 | SAMN04488517_102171 | SAMN04488517_102168 | Type VI secretion protein IcmF. | Type VI secretion system protein ImpJ. | 0.969 |
SFF99589.1 | SFG79796.1 | SAMN04488517_102171 | SAMN04488517_11622 | Type VI secretion protein IcmF. | Hypothetical protein. | 0.550 |
SFF99589.1 | prkC | SAMN04488517_102171 | SAMN04488517_102174 | Type VI secretion protein IcmF. | Serine/threonine protein kinase. | 0.971 |
SFF99589.1 | pstP_1 | SAMN04488517_102171 | SAMN04488517_11623 | Type VI secretion protein IcmF. | Protein phosphatase. | 0.692 |
SFG05677.1 | SFG79796.1 | SAMN04488517_102479 | SAMN04488517_11622 | Hypothetical protein. | Hypothetical protein. | 0.870 |
SFG05677.1 | pstP_1 | SAMN04488517_102479 | SAMN04488517_11623 | Hypothetical protein. | Protein phosphatase. | 0.852 |
SFG79737.1 | SFG79755.1 | SAMN04488517_11619 | SAMN04488517_11620 | Dynamin family protein. | Dynamin family protein. | 0.960 |
SFG79737.1 | SFG79796.1 | SAMN04488517_11619 | SAMN04488517_11622 | Dynamin family protein. | Hypothetical protein. | 0.844 |
SFG79737.1 | SFG79842.1 | SAMN04488517_11619 | SAMN04488517_11624 | Dynamin family protein. | Hypothetical protein. | 0.841 |
SFG79737.1 | pstP_1 | SAMN04488517_11619 | SAMN04488517_11623 | Dynamin family protein. | Protein phosphatase. | 0.807 |
SFG79755.1 | SFG79737.1 | SAMN04488517_11620 | SAMN04488517_11619 | Dynamin family protein. | Dynamin family protein. | 0.960 |
SFG79755.1 | SFG79796.1 | SAMN04488517_11620 | SAMN04488517_11622 | Dynamin family protein. | Hypothetical protein. | 0.844 |
SFG79755.1 | SFG79842.1 | SAMN04488517_11620 | SAMN04488517_11624 | Dynamin family protein. | Hypothetical protein. | 0.844 |
SFG79755.1 | pstP_1 | SAMN04488517_11620 | SAMN04488517_11623 | Dynamin family protein. | Protein phosphatase. | 0.807 |
SFG79796.1 | SFF99510.1 | SAMN04488517_11622 | SAMN04488517_102168 | Hypothetical protein. | Type VI secretion system protein ImpJ. | 0.514 |
SFG79796.1 | SFF99589.1 | SAMN04488517_11622 | SAMN04488517_102171 | Hypothetical protein. | Type VI secretion protein IcmF. | 0.550 |
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