Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF99683.1 | SFG22000.1 | SAMN04488517_102175 | SAMN04488517_103193 | Hypothetical protein. | Signal transduction histidine kinase. | 0.860 |
SFF99683.1 | SFG79796.1 | SAMN04488517_102175 | SAMN04488517_11622 | Hypothetical protein. | Hypothetical protein. | 0.785 |
SFF99683.1 | SFG79842.1 | SAMN04488517_102175 | SAMN04488517_11624 | Hypothetical protein. | Hypothetical protein. | 0.929 |
SFF99683.1 | prkC | SAMN04488517_102175 | SAMN04488517_102174 | Hypothetical protein. | Serine/threonine protein kinase. | 0.530 |
SFF99683.1 | pstP_1 | SAMN04488517_102175 | SAMN04488517_11623 | Hypothetical protein. | Protein phosphatase. | 0.621 |
SFG22000.1 | SFF99683.1 | SAMN04488517_103193 | SAMN04488517_102175 | Signal transduction histidine kinase. | Hypothetical protein. | 0.860 |
SFG22000.1 | SFG79842.1 | SAMN04488517_103193 | SAMN04488517_11624 | Signal transduction histidine kinase. | Hypothetical protein. | 0.931 |
SFG22000.1 | bfmBAB | SAMN04488517_103193 | SAMN04488517_103117 | Signal transduction histidine kinase. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.985 |
SFG22000.1 | gltB | SAMN04488517_103193 | SAMN04488517_102105 | Signal transduction histidine kinase. | Glutamate synthase (NADPH) large subunit. | 0.798 |
SFG22000.1 | pdhC | SAMN04488517_103193 | SAMN04488517_103116 | Signal transduction histidine kinase. | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.561 |
SFG22000.1 | prkC | SAMN04488517_103193 | SAMN04488517_102174 | Signal transduction histidine kinase. | Serine/threonine protein kinase. | 0.860 |
SFG22000.1 | sucB | SAMN04488517_103193 | SAMN04488517_101290 | Signal transduction histidine kinase. | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.561 |
SFG79796.1 | SFF99683.1 | SAMN04488517_11622 | SAMN04488517_102175 | Hypothetical protein. | Hypothetical protein. | 0.785 |
SFG79796.1 | SFG79842.1 | SAMN04488517_11622 | SAMN04488517_11624 | Hypothetical protein. | Hypothetical protein. | 0.962 |
SFG79796.1 | bfmBAB | SAMN04488517_11622 | SAMN04488517_103117 | Hypothetical protein. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.982 |
SFG79796.1 | pdhC | SAMN04488517_11622 | SAMN04488517_103116 | Hypothetical protein. | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.497 |
SFG79796.1 | prkC | SAMN04488517_11622 | SAMN04488517_102174 | Hypothetical protein. | Serine/threonine protein kinase. | 0.680 |
SFG79796.1 | pstP_1 | SAMN04488517_11622 | SAMN04488517_11623 | Hypothetical protein. | Protein phosphatase. | 0.951 |
SFG79796.1 | sucB | SAMN04488517_11622 | SAMN04488517_101290 | Hypothetical protein. | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.497 |
SFG79842.1 | SFF99683.1 | SAMN04488517_11624 | SAMN04488517_102175 | Hypothetical protein. | Hypothetical protein. | 0.929 |
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