STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobS_2Unannotated protein. (328 aa)    
Predicted Functional Partners:
cobT
Unannotated protein.
 
 
 0.993
cobB
Unannotated protein.
     
  0.930
cobN_1
Unannotated protein.
     
 0.763
cobN_2
Unannotated protein.
     
 0.763
NIG5292_00616
Unannotated protein.
 
     0.725
atpF
Unannotated protein; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.559
NIG5292_00611
Unannotated protein.
       0.554
trg_2
Unannotated protein.
       0.535
NIG5292_00612
Unannotated protein; Belongs to the peptidase M24B family.
       0.512
NIG5292_00617
Unannotated protein; Belongs to the BolA/IbaG family.
 
     0.497
Your Current Organism:
Nereida ignava
NCBI taxonomy Id: 282199
Other names: CCUG 49433, CECT 5292, CIP 108404, DSM 16309, N. ignava, Nereida ignava Pujalte et al. 2005, strain 2SM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.