STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtaB_1Unannotated protein. (293 aa)    
Predicted Functional Partners:
tuaD
Unannotated protein.
  
 0.897
galE
Unannotated protein.
  
 0.891
algC_1
Unannotated protein.
   
 0.847
algC_2
Unannotated protein.
   
 0.788
NIG5292_01137
Unannotated protein.
    
 0.777
NIG5292_01136
Unannotated protein.
    
 0.619
epsL
Unannotated protein.
    
 0.616
NIG5292_01529
Unannotated protein.
   
 0.592
NIG5292_01572
Unannotated protein.
    
 0.592
kdsB
Unannotated protein.
       0.589
Your Current Organism:
Nereida ignava
NCBI taxonomy Id: 282199
Other names: CCUG 49433, CECT 5292, CIP 108404, DSM 16309, N. ignava, Nereida ignava Pujalte et al. 2005, strain 2SM4
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.