Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NIG5292_00483 | NIG5292_00484 | GCA_001049735_00483 | GCA_001049735_00484 | Unannotated protein. | Unannotated protein; Belongs to the UPF0276 family. | 0.999 |
NIG5292_00483 | NIG5292_02142 | GCA_001049735_00483 | GCA_001049735_02141 | Unannotated protein. | Unannotated protein. | 0.600 |
NIG5292_00484 | NIG5292_00483 | GCA_001049735_00484 | GCA_001049735_00483 | Unannotated protein; Belongs to the UPF0276 family. | Unannotated protein. | 0.999 |
NIG5292_00484 | NIG5292_02142 | GCA_001049735_00484 | GCA_001049735_02141 | Unannotated protein; Belongs to the UPF0276 family. | Unannotated protein. | 0.646 |
NIG5292_01983 | NIG5292_02142 | GCA_001049735_01982 | GCA_001049735_02141 | Unannotated protein. | Unannotated protein. | 0.519 |
NIG5292_02142 | NIG5292_00483 | GCA_001049735_02141 | GCA_001049735_00483 | Unannotated protein. | Unannotated protein. | 0.600 |
NIG5292_02142 | NIG5292_00484 | GCA_001049735_02141 | GCA_001049735_00484 | Unannotated protein. | Unannotated protein; Belongs to the UPF0276 family. | 0.646 |
NIG5292_02142 | NIG5292_01983 | GCA_001049735_02141 | GCA_001049735_01982 | Unannotated protein. | Unannotated protein. | 0.519 |
NIG5292_02142 | NIG5292_02143 | GCA_001049735_02141 | GCA_001049735_02142 | Unannotated protein. | Unannotated protein. | 0.777 |
NIG5292_02142 | NIG5292_02668 | GCA_001049735_02141 | GCA_001049735_02667 | Unannotated protein. | Unannotated protein. | 0.457 |
NIG5292_02142 | NIG5292_02669 | GCA_001049735_02141 | GCA_001049735_02668 | Unannotated protein. | Unannotated protein. | 0.599 |
NIG5292_02142 | ada | GCA_001049735_02141 | GCA_001049735_01818 | Unannotated protein. | Unannotated protein. | 0.476 |
NIG5292_02142 | gltR | GCA_001049735_02141 | GCA_001049735_02140 | Unannotated protein. | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | 0.544 |
NIG5292_02142 | sdpR_1 | GCA_001049735_02141 | GCA_001049735_00488 | Unannotated protein. | Unannotated protein. | 0.534 |
NIG5292_02142 | sdpR_2 | GCA_001049735_02141 | GCA_001049735_01810 | Unannotated protein. | Unannotated protein. | 0.490 |
NIG5292_02143 | NIG5292_02142 | GCA_001049735_02142 | GCA_001049735_02141 | Unannotated protein. | Unannotated protein. | 0.777 |
NIG5292_02143 | gltR | GCA_001049735_02142 | GCA_001049735_02140 | Unannotated protein. | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | 0.544 |
NIG5292_02668 | NIG5292_02142 | GCA_001049735_02667 | GCA_001049735_02141 | Unannotated protein. | Unannotated protein. | 0.457 |
NIG5292_02668 | NIG5292_02669 | GCA_001049735_02667 | GCA_001049735_02668 | Unannotated protein. | Unannotated protein. | 0.988 |
NIG5292_02669 | NIG5292_02142 | GCA_001049735_02668 | GCA_001049735_02141 | Unannotated protein. | Unannotated protein. | 0.599 |
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