Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NIG5292_02192 | flgE | GCA_001049735_02191 | GCA_001049735_02204 | Unannotated protein. | Unannotated protein. | 0.970 |
NIG5292_02192 | flgF | GCA_001049735_02191 | GCA_001049735_02203 | Unannotated protein. | Unannotated protein. | 0.950 |
NIG5292_02192 | flgG_2 | GCA_001049735_02191 | GCA_001049735_02202 | Unannotated protein. | Unannotated protein; Belongs to the flagella basal body rod proteins family. | 0.911 |
NIG5292_02192 | flgH | GCA_001049735_02191 | GCA_001049735_02201 | Unannotated protein. | Unannotated protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.931 |
NIG5292_02192 | flgI | GCA_001049735_02191 | GCA_001049735_02200 | Unannotated protein. | Unannotated protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.723 |
NIG5292_02192 | flgJ | GCA_001049735_02191 | GCA_001049735_02199 | Unannotated protein. | Unannotated protein. | 0.680 |
NIG5292_02192 | flgK | GCA_001049735_02191 | GCA_001049735_02198 | Unannotated protein. | Unannotated protein; Belongs to the flagella basal body rod proteins family. | 0.991 |
NIG5292_02192 | flgL | GCA_001049735_02191 | GCA_001049735_02197 | Unannotated protein. | Unannotated protein. | 0.998 |
NIG5292_02192 | fliD | GCA_001049735_02191 | GCA_001049735_02223 | Unannotated protein. | Unannotated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.990 |
NIG5292_02192 | fliF | GCA_001049735_02191 | GCA_001049735_02186 | Unannotated protein. | Unannotated protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.979 |
flgE | NIG5292_02192 | GCA_001049735_02204 | GCA_001049735_02191 | Unannotated protein. | Unannotated protein. | 0.970 |
flgE | flgF | GCA_001049735_02204 | GCA_001049735_02203 | Unannotated protein. | Unannotated protein. | 0.994 |
flgE | flgG_2 | GCA_001049735_02204 | GCA_001049735_02202 | Unannotated protein. | Unannotated protein; Belongs to the flagella basal body rod proteins family. | 0.994 |
flgE | flgH | GCA_001049735_02204 | GCA_001049735_02201 | Unannotated protein. | Unannotated protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.997 |
flgE | flgI | GCA_001049735_02204 | GCA_001049735_02200 | Unannotated protein. | Unannotated protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.997 |
flgE | flgJ | GCA_001049735_02204 | GCA_001049735_02199 | Unannotated protein. | Unannotated protein. | 0.938 |
flgE | flgK | GCA_001049735_02204 | GCA_001049735_02198 | Unannotated protein. | Unannotated protein; Belongs to the flagella basal body rod proteins family. | 0.992 |
flgE | flgL | GCA_001049735_02204 | GCA_001049735_02197 | Unannotated protein. | Unannotated protein. | 0.989 |
flgE | fliD | GCA_001049735_02204 | GCA_001049735_02223 | Unannotated protein. | Unannotated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.978 |
flgE | fliF | GCA_001049735_02204 | GCA_001049735_02186 | Unannotated protein. | Unannotated protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.997 |
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