STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
blh_1Unannotated protein. (120 aa)    
Predicted Functional Partners:
blh_2
Unannotated protein.
  
  0.906
NIG5292_02546
Unannotated protein.
 
     0.723
NIG5292_00822
Unannotated protein.
  
  0.525
moeZ_2
Unannotated protein.
  
  0.505
arsC
Unannotated protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
   
   0.490
cmdD
Unannotated protein.
   
 
 0.483
blh_3
Unannotated protein.
 
     0.477
NIG5292_02822
Unannotated protein.
 
   
  0.437
NIG5292_01053
Unannotated protein.
   
  0.429
NIG5292_02666
Unannotated protein.
   
  0.429
Your Current Organism:
Nereida ignava
NCBI taxonomy Id: 282199
Other names: CCUG 49433, CECT 5292, CIP 108404, DSM 16309, N. ignava, Nereida ignava Pujalte et al. 2005, strain 2SM4
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.