STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mglA_2Unannotated protein. (252 aa)    
Predicted Functional Partners:
NIG5292_02639
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
livF_2
Unannotated protein.
 
0.996
livH_2
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
NIG5292_02637
Unannotated protein.
 
 
 0.986
NIG5292_00235
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.984
livH_1
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.969
livK
Unannotated protein.
 
 
 0.960
livF_1
Unannotated protein.
 
 
0.890
NIG5292_01909
Unannotated protein.
  
 
 0.752
acsA_2
Unannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
       0.447
Your Current Organism:
Nereida ignava
NCBI taxonomy Id: 282199
Other names: CCUG 49433, CECT 5292, CIP 108404, DSM 16309, N. ignava, Nereida ignava Pujalte et al. 2005, strain 2SM4
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